Flybrain - An online atlas and database of the Drosophila nervous system.
Comparative Mammalian Brain Collections - Univ. of Wisconsin site has images showing the brain's internal architecture of specimens from over 100 mammalian species for studying differences in brain function and evolution.
Brain Pictures - A set slices from an NMR brain scan, displayed using Javascript so that the user can view them in series by moving the mouse pointer. Non-scientific.
The Whole Brain Atlas - Excellent MRI views of the normal and diseased human brain. Collaboration of MIT and Harvard Univ.
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